ENSG00000123685


Homo sapiens

Features
Gene ID: ENSG00000123685
  
Biological name :BATF3
  
Synonyms : basic leucine zipper ATF-like transcription factor 3 / BATF3 / Q9NR55
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q32.3
Gene start: 212686418
Gene end: 212699985
  
Corresponding Affymetrix probe sets: 220358_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000243440
NCBI entrez gene - 55509     See in Manteia.
OMIM - 612470
RefSeq - NM_018664
RefSeq Peptide - NP_061134
swissprot - Q9NR55
Ensembl - ENSG00000123685
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 batf3ENSDARG00000042577Danio rerio
 BATF3ENSGALG00000035516Gallus gallus
 Batf3ENSMUSG00000026630Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BATF / Q16520 / basic leucine zipper ATF-like transcription factorENSG0000015612743
BATF2 / Q8N1L9 / basic leucine zipper ATF-like transcription factor 2ENSG0000016806235


Protein motifs (from Interpro)
Interpro ID Name
 IPR000837  AP-1 transcription factor
 IPR004827  Basic-leucine zipper domain
 IPR029818  Basic leucine zipper transcriptional factor ATF-like 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0009615 response to virus IEA
 biological_processGO:0043011 myeloid dendritic cell differentiation IEA
 biological_processGO:0097028 dendritic cell differentiation IEA
 cellular_componentGO:0005634 nucleus TAS
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding ISM
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0003714 transcription corepressor activity TAS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr