ENSDARG00000012656


Danio rerio

Features
Gene ID: ENSDARG00000012656
  
Biological name :atf6
  
Synonyms : activating transcription factor 6 / atf6
  
Possible biological names infered from orthology : Cyclic AMP-dependent transcription factor ATF-6 alpha Processed cyclic AMP-dependent transcription factor ATF-6 alpha / F6VAN0 / P18850
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 33809434
Gene end: 33909872
  
Corresponding Affymetrix probe sets: Dr.13163.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000009333
Ensembl peptide - ENSDARP00000127124
NCBI entrez gene - 558071     See in Manteia.
swissprot - Q5RH85
swissprot - U3JA59
ZFIN ID - ZDB-GENE-041014-328
Ensembl - ENSDARG00000012656
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATF6ENSGALG00000032278Gallus gallus
 ATF6ENSG00000118217Homo sapiens
 Atf6ENSMUSG00000026663Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IDA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030968 endoplasmic reticulum unfolded protein response IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0035497 cAMP response element binding IEA


Pathways (from Reactome)
Pathway description
ATF6 (ATF6-alpha) activates chaperones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver fatty , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000014634 mbtps1 / membrane-bound transcription factor peptidase, site 1 / Q14703* / Q9WTZ2* / Membrane-bound transcription factor site-1 protease *  / reaction






 

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