ENSDARG00000012682


Danio rerio

Features
Gene ID: ENSDARG00000012682
  
Biological name :pfn2l
  
Synonyms : pfn2l / profilin 2 like
  
Possible biological names infered from orthology : P35080 / PFN2 / profilin 2 / Q9JJV2
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 10147029
Gene end: 10151839
  
Corresponding Affymetrix probe sets: Dr.25678.1.S1_at (Zebrafish Array)   NM_201466_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113417
Ensembl peptide - ENSDARP00000128438
Ensembl peptide - ENSDARP00000053425
NCBI entrez gene - 321383     See in Manteia.
RefSeq - NM_201466
RefSeq Peptide - NP_958874
swissprot - A5WWI6
swissprot - Q7ZVJ0
ZFIN ID - ZDB-GENE-030131-34
Ensembl - ENSDARG00000012682
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PFN2ENSGALG00000010410Gallus gallus
 PFN2ENSG00000070087Homo sapiens
 Pfn2ENSMUSG00000027805Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pfn2 / profilin 2ENSDARG0000000395273
pfn1 / profilin 1 / P07737* / P62962*ENSDARG0000008809137


Protein motifs (from Interpro)
Interpro ID Name
 IPR005454  Profilin1/2/3, vertebrate
 IPR005455  Profilin
 IPR027310  Profilin conserved site
 IPR029891  Profilin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0030833 regulation of actin filament polymerization IEA
 molecular_functionGO:0003779 actin binding IEA


Pathways (from Reactome)
Pathway description
Signaling by ROBO receptors
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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