ENSDARG00000014139


Danio rerio

Features
Gene ID: ENSDARG00000014139
  
Biological name :srp72
  
Synonyms : signal recognition particle 72 / srp72
  
Possible biological names infered from orthology : O76094
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 1203608
Gene end: 1228690
  
Corresponding Affymetrix probe sets: Dr.9066.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000015026
swissprot - F1QDJ9
ZFIN ID - ZDB-GENE-030131-5546
Ensembl - ENSDARG00000014139
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRP72ENSGALG00000011403Gallus gallus
 SRP72ENSG00000174780Homo sapiens
 Srp72ENSMUSG00000036323Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013699  Signal recognition particle, SRP72 subunit, RNA-binding
 IPR019734  Tetratricopeptide repeat
 IPR026270  Signal recognition particle, SRP72 subunit
 IPR031545  Putative TPR-like repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA
 biological_processGO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005786 signal recognition particle, endoplasmic reticulum targeting IBA
 cellular_componentGO:0048500 signal recognition particle IEA
 molecular_functionGO:0008312 7S RNA binding IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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