ENSGALG00000011403


Gallus gallus

Features
Gene ID: ENSGALG00000011403
  
Biological name :SRP72
  
Synonyms : signal recognition particle 72 / SRP72
  
Possible biological names infered from orthology : O76094
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 49566930
Gene end: 49581556
  
Corresponding Affymetrix probe sets: Gga.8487.1.S1_at (Chicken Array)   Gga.8487.2.S1_at (Chicken Array)   Gga.8487.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053744
Ensembl peptide - ENSGALP00000018577
NCBI entrez gene - 422626     See in Manteia.
RefSeq - NM_001006449
RefSeq Peptide - NP_001006449
swissprot - Q5ZKZ5
swissprot - A0A1D5PLM5
Ensembl - ENSGALG00000011403
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srp72ENSDARG00000014139Danio rerio
 SRP72ENSG00000174780Homo sapiens
 Srp72ENSMUSG00000036323Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013699  Signal recognition particle, SRP72 subunit, RNA-binding
 IPR019734  Tetratricopeptide repeat
 IPR026270  Signal recognition particle, SRP72 subunit
 IPR031545  Putative TPR-like repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA
 biological_processGO:0042493 response to drug IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005786 signal recognition particle, endoplasmic reticulum targeting IEA
 cellular_componentGO:0048500 signal recognition particle IEA
 molecular_functionGO:0005047 signal recognition particle binding IEA
 molecular_functionGO:0008312 7S RNA binding IEA
 molecular_functionGO:0030911 TPR domain binding IEA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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