ENSMUSG00000036323


Mus musculus

Features
Gene ID: ENSMUSG00000036323
  
Biological name :Srp72
  
Synonyms : signal recognition particle 72 / Srp72
  
Possible biological names infered from orthology : O76094
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: C3.3
Gene start: 76974683
Gene end: 76999937
  
Corresponding Affymetrix probe sets: 10522676 (MoGene1.0st)   1428876_at (Mouse Genome 430 2.0 Array)   1428877_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000098648
Ensembl peptide - ENSMUSP00000113312
NCBI entrez gene - 66661     See in Manteia.
MGI - MGI:1333795
RefSeq - NM_025691
RefSeq Peptide - NP_079967
swissprot - F8VQC1
swissprot - E9Q740
Ensembl - ENSMUSG00000036323
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srp72ENSDARG00000014139Danio rerio
 SRP72ENSGALG00000011403Gallus gallus
 SRP72ENSG00000174780Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013699  Signal recognition particle, SRP72 subunit, RNA-binding
 IPR019734  Tetratricopeptide repeat
 IPR026270  Signal recognition particle, SRP72 subunit
 IPR031545  Putative TPR-like repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane ISA
 biological_processGO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation IBA
 biological_processGO:0042493 response to drug ISO
 cellular_componentGO:0005730 nucleolus ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005786 signal recognition particle, endoplasmic reticulum targeting ISO
 cellular_componentGO:0048500 signal recognition particle ISO
 molecular_functionGO:0005047 signal recognition particle binding ISO
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008312 7S RNA binding ISO
 molecular_functionGO:0030911 TPR domain binding ISO
 molecular_functionGO:0043022 ribosome binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr