ENSDARG00000014463


Danio rerio

Features
Gene ID: ENSDARG00000014463
  
Biological name :usf1l
  
Synonyms : upstream transcription factor 1, like / usf1l
  
Possible biological names infered from orthology : P22415 / Q61069 / upstream transcription factor 1 / USF1
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 29803380
Gene end: 29817848
  
Corresponding Affymetrix probe sets: Dr.2401.1.A1_at (Zebrafish Array)   NM_213194_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000009717
Ensembl peptide - ENSDARP00000118969
Ensembl peptide - ENSDARP00000118812
Ensembl peptide - ENSDARP00000119342
Ensembl peptide - ENSDARP00000126786
NCBI entrez gene - 406475     See in Manteia.
RefSeq - NM_213194
RefSeq - XM_005171828
RefSeq Peptide - NP_998359
swissprot - F6PD48
swissprot - F6NL66
swissprot - Q6P015
swissprot - R4GE73
ZFIN ID - ZDB-GENE-040426-2269
Ensembl - ENSDARG00000014463
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USF1ENSG00000158773Homo sapiens
 Usf1ENSMUSG00000026641Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usf1 / upstream transcription factor 1 / P22415* / Q61069*ENSDARG0000004168964
usf2 / upstream transcription factor 2, c-fos interacting / Q15853* / Q64705* / upstream transcription factor 2*ENSDARG0000002022837


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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