ENSDARG00000041689


Danio rerio

Features
Gene ID: ENSDARG00000041689
  
Biological name :usf1
  
Synonyms : upstream transcription factor 1 / usf1
  
Possible biological names infered from orthology : P22415 / Q61069
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 21252532
Gene end: 21262567
  
Corresponding Affymetrix probe sets: Dr.16861.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113974
Ensembl peptide - ENSDARP00000139344
Ensembl peptide - ENSDARP00000123553
Ensembl peptide - ENSDARP00000122834
Ensembl peptide - ENSDARP00000119764
Ensembl peptide - ENSDARP00000119234
Ensembl peptide - ENSDARP00000118512
Ensembl peptide - ENSDARP00000117904
Ensembl peptide - ENSDARP00000116327
Ensembl peptide - ENSDARP00000114463
Ensembl peptide - ENSDARP00000002107
NCBI entrez gene - 393266     See in Manteia.
RefSeq - NM_200296
RefSeq Peptide - NP_956590
swissprot - E9QFN2
swissprot - E9QFD0
swissprot - E9QEC7
swissprot - E9QDM4
swissprot - E9QBT6
swissprot - E9QBR1
swissprot - A0A0R4IXK2
swissprot - F1QQW3
swissprot - F1QUA1
swissprot - E9QIH8
swissprot - E9QHY9
ZFIN ID - ZDB-GENE-040426-1072
Ensembl - ENSDARG00000041689
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USF1ENSG00000158773Homo sapiens
 Usf1ENSMUSG00000026641Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usf1l / upstream transcription factor 1, like / USF1* / P22415* / Q61069* / upstream transcription factor 1*ENSDARG0000001446359
usf2 / upstream transcription factor 2, c-fos interacting / Q15853* / Q64705* / upstream transcription factor 2*ENSDARG0000002022843


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr