ENSDARG00000014914


Danio rerio

Features
Gene ID: ENSDARG00000014914
  
Biological name :lamp2
  
Synonyms : lamp2 / lysosomal-associated membrane protein 2
  
Possible biological names infered from orthology : Lysosome-associated membrane glycoprotein 2 / P13473 / P17047
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 33473804
Gene end: 33481618
  
Corresponding Affymetrix probe sets: Dr.20173.1.S1_at (Zebrafish Array)   NM_001013533_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000145491
Ensembl peptide - ENSDARP00000150722
Ensembl peptide - ENSDARP00000146649
Ensembl peptide - ENSDARP00000105565
Ensembl peptide - ENSDARP00000116644
Ensembl peptide - ENSDARP00000119168
Ensembl peptide - ENSDARP00000120283
Ensembl peptide - ENSDARP00000141125
NCBI entrez gene - 541406     See in Manteia.
RefSeq - NM_001013533
RefSeq Peptide - NP_001013551
swissprot - F1QCL4
swissprot - F1R902
swissprot - Q5BKX3
swissprot - E9QB34
swissprot - A0A0R4IZ00
ZFIN ID - ZDB-GENE-030729-9
Ensembl - ENSDARG00000014914
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LAMP2ENSGALG00000008572Gallus gallus
 LAMP2ENSG00000005893Homo sapiens
 Lamp2ENSMUSG00000016534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LAMP1 / lysosomal associated membrane protein 1 / P11279*ENSDARG0000010018130
lamp1 / lysosomal-associated membrane protein 1 / P11279* / P11438* / Lysosome-associated membrane glycoprotein 1 *ENSDARG0000009261026
si:ch211-212k18.7 / CD68* / P34810* / P31996* / Macrosialin * / CD68 molecule*ENSDARG0000005550420


Protein motifs (from Interpro)
Interpro ID Name
 IPR002000  Lysosome-associated membrane glycoprotein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr