ENSGALG00000008572


Gallus gallus

Features
Gene ID: ENSGALG00000008572
  
Biological name :LAMP2
  
Synonyms : LAMP2 / Lysosome-associated membrane glycoprotein 2 / Q90617
  
Possible biological names infered from orthology : lysosomal associated membrane protein 2 / P13473 / P17047
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 16487911
Gene end: 16504638
  
Corresponding Affymetrix probe sets: Gga.2572.1.S1_at (Chicken Array)   Gga.2942.2.S1_at (Chicken Array)   Gga.2942.3.S1_at (Chicken Array)   Gga.2942.3.S1_s_at (Chicken Array)   GgaAffx.21827.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013946
Ensembl peptide - ENSGALP00000050708
NCBI entrez gene - 414800     See in Manteia.
RefSeq - XM_015278205
RefSeq - NM_001001749
RefSeq - XM_015278204
RefSeq Peptide - NP_001001749
swissprot - Q90617
Ensembl - ENSGALG00000008572
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lamp2ENSDARG00000014914Danio rerio
 LAMP2ENSG00000005893Homo sapiens
 Lamp2ENSMUSG00000016534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LAMP1 / lysosome-associated membrane glycoprotein 1 precursor / P11438* / P11279* / lysosomal associated membrane protein 1* / Lysosome-associated membrane glycoprotein 1 *ENSGALG0000003769734
LAMP3 / lysosome-associated membrane glycoprotein 3 precursor / Q9UQV4* / Q7TST5* / lysosomal associated membrane protein 3* / Lysosome-associated membrane glycoprotein 3 *ENSGALG0000000875919


Protein motifs (from Interpro)
Interpro ID Name
 IPR002000  Lysosome-associated membrane glycoprotein
 IPR018134  Lysosome-associated membrane glycoprotein, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006605 protein targeting ISS
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0009267 cellular response to starvation ISS
 biological_processGO:0031647 regulation of protein stability IEA
 biological_processGO:0046716 muscle cell cellular homeostasis IEA
 biological_processGO:0050821 protein stabilization IEA
 biological_processGO:0061684 chaperone-mediated autophagy ISS
 biological_processGO:0061740 protein targeting to lysosome involved in chaperone-mediated autophagy ISS
 biological_processGO:0097352 autophagosome maturation ISS
 biological_processGO:1905146 lysosomal protein catabolic process ISS
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030670 phagocytic vesicle membrane IEA
 cellular_componentGO:0031088 platelet dense granule membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0044754 autolysosome IEA
 cellular_componentGO:0070062 extracellular exosome IEA
 cellular_componentGO:0097637 integral component of autophagosome membrane IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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