ENSDARG00000015343


Danio rerio

Features
Gene ID: ENSDARG00000015343
  
Biological name :pgd
  
Synonyms : pgd / phosphogluconate dehydrogenase
  
Possible biological names infered from orthology : P52209 / Q9DCD0
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 29381441
Gene end: 29394505
  
Corresponding Affymetrix probe sets: Dr.6619.1.S1_at (Zebrafish Array)   NM_213453_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000007588
NCBI entrez gene - 406762     See in Manteia.
RefSeq - NM_213453
RefSeq Peptide - NP_998618
swissprot - F1Q883
ZFIN ID - ZDB-GENE-040426-2807
Ensembl - ENSDARG00000015343
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PGDENSGALG00000002797Gallus gallus
 PGDENSG00000142657Homo sapiens
 PgdENSMUSG00000028961Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006113  6-phosphogluconate dehydrogenase, decarboxylating
 IPR006114  6-phosphogluconate dehydrogenase, C-terminal
 IPR006115  6-phosphogluconate dehydrogenase, NADP-binding
 IPR006183  6-phosphogluconate dehydrogenase
 IPR006184  6-phosphogluconate-binding site
 IPR008927  6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
 IPR013328  6-phosphogluconate dehydrogenase, domain 2
 IPR016040  NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006098 pentose-phosphate shunt IEA
 biological_processGO:0019521 D-gluconate metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
Pentose phosphate pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000015343 pgd / phosphogluconate dehydrogenase / P52209* / Q9DCD0*  / complex






 

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