ENSDARG00000016016


Danio rerio

Features
Gene ID: ENSDARG00000016016
  
Biological name :dbnlb
  
Synonyms : dbnlb / drebrin-like b
  
Possible biological names infered from orthology : DBNL / drebrin like / Drebrin-like protein / Q62418 / Q9UJU6
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 52314542
Gene end: 52350684
  
Corresponding Affymetrix probe sets: Dr.21254.1.A1_at (Zebrafish Array)   NM_001020700_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000027911
Ensembl peptide - ENSDARP00000104897
NCBI entrez gene - 553729     See in Manteia.
RefSeq - XM_005167337
RefSeq - NM_001020700
RefSeq Peptide - NP_001018536
swissprot - F1QIB3
swissprot - E7EXG2
ZFIN ID - ZDB-GENE-050522-293
Ensembl - ENSDARG00000016016
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DBNLENSG00000136279Homo sapiens
 DbnlENSMUSG00000020476Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dbnla / drebrin-like a / DBNL* / Q9UJU6* / Q62418* / drebrin like* / Drebrin-like protein *ENSDARG0000000817054
si:dkey-40c11.2ENSDARG0000003248234
dbn1 / drebrin 1 / Q16643*ENSDARG0000006911330
cttn / cortactin / Q14247*ENSDARG0000001177719
hcls1 / hematopoietic cell-specific Lyn substrate 1 / P14317* / P49710* / Hematopoietic lineage cell-specific protein *ENSDARG0000001272918


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR002108  Actin-depolymerising factor homology domain
 IPR029006  ADF-H/Gelsolin-like domain superfamily
 IPR029923  Drebrin-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0007416 synapse assembly IEA
 biological_processGO:0048812 neuron projection morphogenesis IEA
 biological_processGO:0097178 ruffle assembly IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
Caspase-mediated cleavage of cytoskeletal proteins
Neurexins and neuroligins
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000055459 dlgap3 / discs, large (Drosophila) homolog-associated protein 3 / O95886* / Q6PFD5* / DLG associated protein 3* / Disks large-associated protein 3 *  / reaction / complex
 ENSDARG00000062325 shank2 / SH3 and multiple ankyrin repeat domains 2 / Q80Z38* / Q9UPX8* / SH3 and multiple ankyrin repeat domains protein 2 *  / reaction / complex






 

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