ENSDARG00000016038


Danio rerio

Features
Gene ID: ENSDARG00000016038
  
Biological name :hacd3
  
Synonyms : 3-hydroxyacyl-CoA dehydratase 3 / hacd3 / Q7SY06
  
Possible biological names infered from orthology : Q8K2C9 / Q9P035 / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 18982077
Gene end: 18995283
  
Corresponding Affymetrix probe sets: Dr.15374.1.A1_at (Zebrafish Array)   NM_001044984_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000016888
NCBI entrez gene - 393441     See in Manteia.
RefSeq - NM_001044984
RefSeq Peptide - NP_001038449
swissprot - B3DGL9
swissprot - Q7SY06
ZFIN ID - ZDB-GENE-040426-1200
Ensembl - ENSDARG00000016038
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HACD3ENSGALG00000007481Gallus gallus
 HACD3ENSG00000074696Homo sapiens
 Hacd3ENSMUSG00000033629Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HACD4 / si:ch73-41h24.1 / A2AKM2* / Q5VWC8* / 3-hydroxyacyl-CoA dehydratase 4* / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 *ENSDARG0000010222119
hacd1 / 3-hydroxyacyl-CoA dehydratase 1 / B0YJ81*ENSDARG0000010374417
hacd2 / 3-hydroxyacyl-CoA dehydratase 2 / Q6Y1H2* / Q9D3B1* / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 *ENSDARG0000001480616
CR376779.1 / HACD2* / Q6Y1H2* / 3-hydroxyacyl-CoA dehydratase 2*ENSDARG000001097604


Protein motifs (from Interpro)
Interpro ID Name
 IPR007052  CS domain
 IPR007482  Protein-tyrosine phosphatase-like, PTPLA
 IPR008978  HSP20-like chaperone


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0030148 sphingolipid biosynthetic process IBA
 biological_processGO:0030497 fatty acid elongation ISS
 biological_processGO:0042761 very long-chain fatty acid biosynthetic process ISS
 cellular_componentGO:0005783 endoplasmic reticulum ISS
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0018812 3-hydroxyacyl-CoA dehydratase activity ISS
 molecular_functionGO:0102158 very-long-chain 3-hydroxyacyl-CoA dehydratase activity IEA
 molecular_functionGO:0102343 3-hydroxy-arachidoyl-CoA dehydratase activity IEA
 molecular_functionGO:0102344 3-hydroxy-behenoyl-CoA dehydratase activity IEA
 molecular_functionGO:0102345 3-hydroxy-lignoceroyl-CoA dehydratase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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