ENSDARG00000102221


Danio rerio

Features
Gene ID: ENSDARG00000102221
  
Biological name :HACD4
  
Synonyms : HACD4 / si:ch73-41h24.1
  
Possible biological names infered from orthology : 3-hydroxyacyl-CoA dehydratase 4 / A2AKM2 / Q5VWC8 / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 18993828
Gene end: 19003504
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132812
NCBI entrez gene - 561303     See in Manteia.
RefSeq - NM_001200011
RefSeq Peptide - NP_001186940
swissprot - A0A0R4IHH3
ZFIN ID - ZDB-GENE-030131-3627
Ensembl - ENSDARG00000102221
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HACD4ENSGALG00000028142Gallus gallus
 HACD4ENSG00000188921Homo sapiens
 Hacd4ENSMUSG00000028497Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hacd3 / Q7SY06 / 3-hydroxyacyl-CoA dehydratase 3 / Q8K2C9* / Q9P035* / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 *ENSDARG0000001603831
hacd2 / 3-hydroxyacyl-CoA dehydratase 2 / Q6Y1H2* / Q9D3B1* / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 *ENSDARG0000001480620
hacd1 / 3-hydroxyacyl-CoA dehydratase 1 / B0YJ81*ENSDARG0000010374420
CR376779.1 / HACD2* / Q6Y1H2* / 3-hydroxyacyl-CoA dehydratase 2*ENSDARG000001097606


Protein motifs (from Interpro)
Interpro ID Name
 IPR007482  Protein-tyrosine phosphatase-like, PTPLA


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0102158 very-long-chain 3-hydroxyacyl-CoA dehydratase activity IEA
 molecular_functionGO:0102343 3-hydroxy-arachidoyl-CoA dehydratase activity IEA
 molecular_functionGO:0102344 3-hydroxy-behenoyl-CoA dehydratase activity IEA
 molecular_functionGO:0102345 3-hydroxy-lignoceroyl-CoA dehydratase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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