ENSMUSG00000028497


Mus musculus

Features
Gene ID: ENSMUSG00000028497
  
Biological name :Hacd4
  
Synonyms : A2AKM2 / Hacd4 / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4
  
Possible biological names infered from orthology : 3-hydroxyacyl-CoA dehydratase 4 / Q5VWC8
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: C4
Gene start: 88396144
Gene end: 88438928
  
Corresponding Affymetrix probe sets: 10514275 (MoGene1.0st)   1450967_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030221
Ensembl peptide - ENSMUSP00000119411
Ensembl peptide - ENSMUSP00000122565
NCBI entrez gene - 66775     See in Manteia.
MGI - MGI:1914025
RefSeq - NM_025760
RefSeq - XM_006538190
RefSeq - XM_006538191
RefSeq - XM_006538192
RefSeq - XM_006538193
RefSeq - XM_006538189
RefSeq Peptide - NP_080036
swissprot - F7CPS1
swissprot - A2AKM2
swissprot - Z4YMP4
Ensembl - ENSMUSG00000028497
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HACD4ENSDARG00000102221Danio rerio
 HACD4ENSGALG00000028142Gallus gallus
 HACD4ENSG00000188921Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Hacd3 / Q8K2C9 / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 / Q9P035* / 3-hydroxyacyl-CoA dehydratase 3*ENSMUSG0000003362940
Hacd2 / Q9D3B1 / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 / Q6Y1H2* / 3-hydroxyacyl-CoA dehydratase 2*ENSMUSG0000003537624
Hacd1 / 3-hydroxyacyl-CoA dehydratase 1 / B0YJ81*ENSMUSG0000006327521


Protein motifs (from Interpro)
Interpro ID Name
 IPR007482  Protein-tyrosine phosphatase-like, PTPLA


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0030148 sphingolipid biosynthetic process IBA
 biological_processGO:0030497 fatty acid elongation IEA
 biological_processGO:0042761 very long-chain fatty acid biosynthetic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0018812 3-hydroxyacyl-CoA dehydratase activity IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0102158 very-long-chain 3-hydroxyacyl-CoA dehydratase activity IEA
 molecular_functionGO:0102343 3-hydroxy-arachidoyl-CoA dehydratase activity IEA
 molecular_functionGO:0102344 3-hydroxy-behenoyl-CoA dehydratase activity IEA
 molecular_functionGO:0102345 3-hydroxy-lignoceroyl-CoA dehydratase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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