ENSGALG00000028142


Gallus gallus

Features
Gene ID: ENSGALG00000028142
  
Biological name :HACD4
  
Synonyms : 3-hydroxyacyl-CoA dehydratase 4 / HACD4
  
Possible biological names infered from orthology : A2AKM2 / Q5VWC8 / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 34263802
Gene end: 34278261
  
Corresponding Affymetrix probe sets: Gga.12533.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042052
NCBI entrez gene - 427232     See in Manteia.
RefSeq - XM_424816
swissprot - R4GIV6
Ensembl - ENSGALG00000028142
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HACD4ENSDARG00000102221Danio rerio
 HACD4ENSG00000188921Homo sapiens
 Hacd4ENSMUSG00000028497Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HACD3 / Q5ZM57 / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase / Q8K2C9* / Q9P035* / 3-hydroxyacyl-CoA dehydratase 3* / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 *ENSGALG0000000748141
HACD2 / 3-hydroxyacyl-CoA dehydratase 2 / Q6Y1H2* / Q9D3B1* / Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 *ENSGALG0000001170421
HACD1 / 3-hydroxyacyl-CoA dehydratase 1 / B0YJ81*ENSGALG0000000865919


Protein motifs (from Interpro)
Interpro ID Name
 IPR007482  Protein-tyrosine phosphatase-like, PTPLA


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0030148 sphingolipid biosynthetic process IBA
 biological_processGO:0030497 fatty acid elongation IEA
 biological_processGO:0042761 very long-chain fatty acid biosynthetic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0018812 3-hydroxyacyl-CoA dehydratase activity IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0102158 very-long-chain 3-hydroxyacyl-CoA dehydratase activity IEA
 molecular_functionGO:0102343 3-hydroxy-arachidoyl-CoA dehydratase activity IEA
 molecular_functionGO:0102344 3-hydroxy-behenoyl-CoA dehydratase activity IEA
 molecular_functionGO:0102345 3-hydroxy-lignoceroyl-CoA dehydratase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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