ENSDARG00000016543


Danio rerio

Features
Gene ID: ENSDARG00000016543
  
Biological name :mrm3a
  
Synonyms : mitochondrial rRNA methyltransferase 3a / mrm3a
  
Possible biological names infered from orthology : mitochondrial rRNA methyltransferase 3 / MRM3 / Q5ND52 / Q9HC36 / rRNA methyltransferase 3, mitochondrial
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 16185118
Gene end: 16192208
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119941
NCBI entrez gene - 550390     See in Manteia.
RefSeq - NM_001017695
RefSeq Peptide - NP_001017695
swissprot - F1R7U4
ZFIN ID - ZDB-GENE-050417-184
Ensembl - ENSDARG00000016543
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MRM3ENSGALG00000004799Gallus gallus
 MRM3ENSG00000171861Homo sapiens
 Mrm3ENSMUSG00000038046Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mrm3b / mitochondrial rRNA methyltransferase 3b / MRM3* / Q9HC36* / mitochondrial rRNA methyltransferase 3*ENSDARG0000006908242


Protein motifs (from Interpro)
Interpro ID Name
 IPR001537  tRNA/rRNA methyltransferase, SpoU type
 IPR013123  RNA 2-O ribose methyltransferase, substrate binding
 IPR029026  tRNA (guanine-N1-)-methyltransferase, N-terminal
 IPR029028  Alpha/beta knot methyltransferases
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0032259 methylation IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008173 RNA methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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