ENSDARG00000069082


Danio rerio

Features
Gene ID: ENSDARG00000069082
  
Biological name :mrm3b
  
Synonyms : mitochondrial rRNA methyltransferase 3b / mrm3b
  
Possible biological names infered from orthology : mitochondrial rRNA methyltransferase 3 / MRM3 / Q5ND52 / Q9HC36 / rRNA methyltransferase 3, mitochondrial
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 39673157
Gene end: 39685326
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000091013
NCBI entrez gene - 792923     See in Manteia.
swissprot - F1QYC8
ZFIN ID - ZDB-GENE-030131-158
Ensembl - ENSDARG00000069082
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MRM3ENSGALG00000004799Gallus gallus
 MRM3ENSG00000171861Homo sapiens
 Mrm3ENSMUSG00000038046Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mrm3a / mitochondrial rRNA methyltransferase 3a / MRM3* / Q5ND52* / Q9HC36* / mitochondrial rRNA methyltransferase 3* / rRNA methyltransferase 3, mitochondrial *ENSDARG0000001654341


Protein motifs (from Interpro)
Interpro ID Name
 IPR001537  tRNA/rRNA methyltransferase, SpoU type
 IPR013123  RNA 2-O ribose methyltransferase, substrate binding
 IPR029026  tRNA (guanine-N1-)-methyltransferase, N-terminal
 IPR029028  Alpha/beta knot methyltransferases
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0032259 methylation IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008173 RNA methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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