ENSGALG00000004799


Gallus gallus

Features
Gene ID: ENSGALG00000004799
  
Biological name :MRM3
  
Synonyms : mitochondrial rRNA methyltransferase 3 / MRM3
  
Possible biological names infered from orthology : Q5ND52 / Q9HC36 / rRNA methyltransferase 3, mitochondrial
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 6923898
Gene end: 6926192
  
Corresponding Affymetrix probe sets: Gga.8859.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007646
NCBI entrez gene - 417620     See in Manteia.
RefSeq - XM_015296117
RefSeq - XM_415864
swissprot - F1NG21
Ensembl - ENSGALG00000004799
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mrm3aENSDARG00000016543Danio rerio
 mrm3bENSDARG00000069082Danio rerio
 MRM3ENSG00000171861Homo sapiens
 Mrm3ENSMUSG00000038046Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001537  tRNA/rRNA methyltransferase, SpoU type
 IPR013123  RNA 2-O ribose methyltransferase, substrate binding
 IPR029026  tRNA (guanine-N1-)-methyltransferase, N-terminal
 IPR029028  Alpha/beta knot methyltransferases
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008173 RNA methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr