ENSDARG00000016818


Danio rerio

Features
Gene ID: ENSDARG00000016818
  
Biological name :abcg2d
  
Synonyms : abcg2d / ATP-binding cassette, sub-family G (WHITE), member 2d
  
Possible biological names infered from orthology : ABCG2 / Abcg3 / ATP binding cassette subfamily G member 2 (Junior blood group) / ATP binding cassette subfamily G member 3 / Q99P81 / Q9UNQ0
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 50566256
Gene end: 50590626
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113983
Ensembl peptide - ENSDARP00000024285
NCBI entrez gene - 735310     See in Manteia.
RefSeq - NM_001042772
RefSeq Peptide - NP_001036237
swissprot - B8JIM9
swissprot - Q2Q444
ZFIN ID - ZDB-GENE-050517-38
Ensembl - ENSDARG00000016818
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCG2ENSGALG00000030677Gallus gallus
 ABCG2ENSG00000118777Homo sapiens
 Abcg2ENSMUSG00000029802Mus musculus
 Abcg3ENSMUSG00000029299Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcg2a / ATP-binding cassette, sub-family G (WHITE), member 2a / Abcg3* / ABCG2* / Q9UNQ0* / Q99P81* / ATP binding cassette subfamily G member 3* / ATP binding cassette subfamily G member 2...ENSDARG0000010007561
abcg2b / ATP-binding cassette, sub-family G (WHITE), member 2bENSDARG0000007936142
abcg2c / ATP-binding cassette, sub-family G (WHITE), member 2cENSDARG0000005857442
abcg5 / ATP-binding cassette, sub-family G (WHITE), member 5 / Q99PE8* / Q9H222* / ATP binding cassette subfamily G member 5*ENSDARG0000006307825
abcg4a / ATP-binding cassette, sub-family G (WHITE), member 4a / ABCG4* / Q9H172* / ATP binding cassette subfamily G member 4*ENSDARG0000006104725
abcg1 / ATP-binding cassette, sub-family G (WHITE), member 1 / P45844* / Q64343* / ATP binding cassette subfamily G member 1*ENSDARG0000006347524
abcg4b / ATP-binding cassette, sub-family G (WHITE), member 4b / ABCG4* / Q9H172* / ATP binding cassette subfamily G member 4*ENSDARG0000007806824


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR013525  ABC-2 type transporter
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030256  ATP-binding cassette subfamily G member 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006855 drug transmembrane transport IBA
 biological_processGO:0033344 cholesterol efflux IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0016324 apical plasma membrane IBA
 cellular_componentGO:0043235 receptor complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0017127 cholesterol transporter activity IBA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IBA


Pathways (from Reactome)
Pathway description
Iron uptake and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000016818 abcg2d / ATP-binding cassette, sub-family G (WHITE), member 2d / Abcg3* / ABCG2* / Q9UNQ0* / Q99P81* / ATP binding cassette subfamily G member 3* / ATP binding cassette subfamily G member 2...  / complex






 

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