ENSDARG00000017220


Danio rerio

Features
Gene ID: ENSDARG00000017220
  
Biological name :otud7b
  
Synonyms : otud7b / OTU deubiquitinase 7B
  
Possible biological names infered from orthology : B2RUR8 / OTU domain-containing protein 7B / Q6GQQ9
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 45930962
Gene end: 45982657
  
Corresponding Affymetrix probe sets: Dr.14554.1.S1_at (Zebrafish Array)   NM_001077744_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000041810
Ensembl peptide - ENSDARP00000107347
NCBI entrez gene - 777637     See in Manteia.
RefSeq - NM_001077744
RefSeq Peptide - NP_001071212
swissprot - F1QJ69
swissprot - E7F4E2
ZFIN ID - ZDB-GENE-060616-1
Ensembl - ENSDARG00000017220
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OTUD7BENSGALG00000013348Gallus gallus
 OTUD7BENSG00000264522Homo sapiens
 B2RUR8ENSMUSG00000038495Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OTUD7A / si:dkey-37f18.2 / Q8R554* / Q8TE49* / OTU deubiquitinase 7A* / OTU domain-containing protein 7A *ENSDARG0000004555653
tnfaip3 / tumor necrosis factor, alpha-induced protein 3 / P21580* / Q60769* / TNF alpha induced protein 3*ENSDARG0000002777717
A0JMQ9 / zranb1b / zinc finger, RAN-binding domain containing 1bENSDARG0000006319013
zranb1a / zinc finger, RAN-binding domain containing 1a / Q9UGI0* / ZRANB1* / zinc finger RANBP2-type containing 1*ENSDARG0000006025712


Protein motifs (from Interpro)
Interpro ID Name
 IPR002653  Zinc finger, A20-type
 IPR003323  OTU domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007219 Notch signaling pathway IMP
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
TNFR1-induced proapoptotic signaling
Regulation of TNFR1 signaling
TNFR1-induced NFkappaB signaling pathway
Ovarian tumor domain proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009248 neuron neuron hyperplastic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr