ENSDARG00000017423


Danio rerio

Features
Gene ID: ENSDARG00000017423
  
Biological name :patl1
  
Synonyms : patl1 / protein associated with topoisomerase II homolog 1 (yeast)
  
Possible biological names infered from orthology : 1 / PAT1 homolog 1, processing body mRNA decay factor / Q3TC46 / Q86TB9
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 52763979
Gene end: 52790782
  
Corresponding Affymetrix probe sets: Dr.20116.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000091710
Ensembl peptide - ENSDARP00000116095
swissprot - B8JLU1
swissprot - F1QIN2
ZFIN ID - ZDB-GENE-070209-83
Ensembl - ENSDARG00000017423
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PATL1ENSG00000166889Homo sapiens
 1 ENSMUSG00000046139Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-103b1.2 / 2 * / PATL2* / A2ARM1* / C9JE40* / PAT1 homolog 2*ENSDARG0000008956725


Protein motifs (from Interpro)
Interpro ID Name
 IPR019167  Topoisomerase II-associated protein PAT1


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
mRNA decay by 5 to 3 exoribonuclease


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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