ENSDARG00000018553


Danio rerio

Features
Gene ID: ENSDARG00000018553
  
Biological name :ifih1
  
Synonyms : ifih1 / interferon induced with helicase C domain 1
  
Possible biological names infered from orthology : Interferon-induced helicase C domain-containing protein 1 / Q8R5F7 / Q9BYX4
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 51147380
Gene end: 51217396
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000013943
Ensembl peptide - ENSDARP00000118927
Ensembl peptide - ENSDARP00000151951
swissprot - B0R1C5
swissprot - F1R4B9
ZFIN ID - ZDB-GENE-081104-438
Ensembl - ENSDARG00000018553
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IFIH1ENSGALG00000041192Gallus gallus
 IFIH1ENSG00000115267Homo sapiens
 Ifih1ENSMUSG00000026896Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dhx58 / DEXH (Asp-Glu-X-His) box polypeptide 58 / Q96C10* / DExH-box helicase 58*ENSDARG0000008946328
dicer1 / Q6TV19 / dicer 1, ribonuclease type III / Q9UPY3* / dicer 1, ribonuclease III*ENSDARG0000000112916
CABZ01079748.1 / FANCM* / Q8IYD8* / Fanconi anemia complementation group M*ENSDARG000001121366
fancm / Fanconi anemia, complementation group M / Q8IYD8*ENSDARG000001039330


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR006935  Helicase/UvrB, N-terminal
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR021673  RIG-I-like receptor, C-terminal regulatory domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031964  Caspase recruitment domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IGI
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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