ENSDARG00000018721


Danio rerio

Features
Gene ID: ENSDARG00000018721
  
Biological name :npnt
  
Synonyms : nephronectin / npnt
  
Possible biological names infered from orthology : Q6UXI9 / Q91V88
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 50085440
Gene end: 50188006
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000020901
Ensembl peptide - ENSDARP00000139806
Ensembl peptide - ENSDARP00000132626
Ensembl peptide - ENSDARP00000122290
NCBI entrez gene - 563273     See in Manteia.
swissprot - B8A5G5
swissprot - B8A5G4
swissprot - A0A0R4IGU5
swissprot - H2DL87
swissprot - H2DL88
ZFIN ID - ZDB-GENE-090312-201
Ensembl - ENSDARG00000018721
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NPNTENSGALG00000043555Gallus gallus
 NPNTENSG00000168743Homo sapiens
 NpntENSMUSG00000040998Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nephronectin / NPNT (1 of many) / NPNT* / Q6UXI9*ENSDARG0000010079741
egfl6 / EGF-like-domain, multiple 6 / Q8IUX8* / Q9JJZ5* / Epidermal growth factor-like protein 6 *ENSDARG0000004595835
si:ch211-194g2.4 / EGFL7* / Q9UHF1* / EGF like domain multiple 7*ENSDARG0000009464816
egfl7 / EGF-like-domain, multiple 7 / Q9UHF1*ENSDARG0000010065711


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR000998  MAM domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR018097  EGF-like calcium-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003171 atrioventricular valve development IMP
 biological_processGO:0060347 heart trabecula formation IMP
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart straight , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
Show

 ZFA:0001315 atrioventricular canal atrioventricular canal endocardium increased length , abnormal
atrioventricular canal increased length , abnormal
atrioventricular canal cardiac muscle cell increased amount , abnormal
atrioventricular canal endocardium decreased length , abnormal
Show

 ZFA:0001318 cardiac jelly cardiac jelly increased volume , abnormal
cardiac jelly mislocalised , abnormal
cardiac jelly decreased volume , abnormal
Show

 ZFA:0001320 endocardium endocardium far from myocardium , abnormal
Show

 ZFA:0005059 trabecular layer trabecular layer morphology , abnormal
Show

 ZFA:0005064 atrioventricular valve atrioventricular valve morphology , abnormal
atrioventricular valve increased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr