ENSDARG00000020482


Danio rerio

Features
Gene ID: ENSDARG00000020482
  
Biological name :nono
  
Synonyms : nono / non-POU domain containing, octamer-binding
  
Possible biological names infered from orthology : non-POU-domain-containing, octamer binding protein / Q15233 / Q99K48
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 22590326
Gene end: 22602979
  
Corresponding Affymetrix probe sets: Dr.20957.1.S1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000114380
Ensembl peptide - ENSDARP00000014106
Ensembl peptide - ENSDARP00000143833
NCBI entrez gene - 321994     See in Manteia.
swissprot - A2BGU3
swissprot - Q802Z5
ZFIN ID - ZDB-GENE-030131-713
Ensembl - ENSDARG00000020482
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NONOENSGALG00000005507Gallus gallus
 NONOENSG00000147140Homo sapiens
 NonoENSMUSG00000031311Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pspc1 / Q1JPY8 / paraspeckle component 1 / Q8R326* / Q8WXF1*ENSDARG0000000662159
sfpq / splicing factor proline/glutamine-rich / P23246* / Q8VIJ6* / splicing factor proline and glutamine rich*ENSDARG0000001156457


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012975  NOPS
 IPR034552  p54nrb, RNA recognition motif 1
 IPR034558  p54nrb, RNA recognition motif 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0007417 central nervous system development IMP
 biological_processGO:0061053 somite development IMP
 biological_processGO:0071599 otic vesicle development IMP
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain decreased size , abnormal
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 ZFA:0000012 central nervous system central nervous system decreased size , abnormal
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 ZFA:0000051 otic vesicle otic vesicle decreased size , abnormal
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 ZFA:0000054 pericardium pericardium decreased size , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000155 somite somite morphology , abnormal
somite absent , abnormal
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 ZFA:0001094 whole organism whole organism morphology , abnormal
whole organism apoptotic , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk decreased length , abnormal
trunk increased thickness , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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