ENSG00000147140


Homo sapiens

Features
Gene ID: ENSG00000147140
  
Biological name :NONO
  
Synonyms : NONO / non-POU domain containing octamer binding / Q15233
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q13.1
Gene start: 71283192
Gene end: 71301168
  
Corresponding Affymetrix probe sets: 200057_s_at (Human Genome U133 Plus 2.0 Array)   208698_s_at (Human Genome U133 Plus 2.0 Array)   210470_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000362963
Ensembl peptide - ENSP00000406673
Ensembl peptide - ENSP00000441364
Ensembl peptide - ENSP00000415777
Ensembl peptide - ENSP00000413350
Ensembl peptide - ENSP00000410299
Ensembl peptide - ENSP00000409773
Ensembl peptide - ENSP00000276079
Ensembl peptide - ENSP00000362947
NCBI entrez gene - 4841     See in Manteia.
OMIM - 300084
RefSeq - NM_001145410
RefSeq - NM_007363
RefSeq - NM_001145408
RefSeq - NM_001145409
RefSeq Peptide - NP_001138882
RefSeq Peptide - NP_031389
RefSeq Peptide - NP_001138880
RefSeq Peptide - NP_001138881
swissprot - Q15233
swissprot - C9JJ13
swissprot - C9J4X2
swissprot - C9IZL7
swissprot - A0A0S2Z4Z9
swissprot - H7C367
swissprot - C9JYS8
Ensembl - ENSG00000147140
  
Related genetic diseases (OMIM): 300967 - Mental retardation, X-linked, syndromic 34, 300967

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nonoENSDARG00000020482Danio rerio
 NONOENSGALG00000005507Gallus gallus
 NonoENSMUSG00000031311Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PSPC1 / Q8WXF1 / paraspeckle component 1ENSG0000012139060
SFPQ / P23246 / splicing factor proline and glutamine richENSG0000011656057


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012975  NOPS
 IPR034552  p54nrb, RNA recognition motif 1
 IPR034558  p54nrb, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0002218 activation of innate immune response IDA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006397 mRNA processing TAS
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007623 circadian rhythm ISS
 biological_processGO:0008380 RNA splicing TAS
 biological_processGO:0042752 regulation of circadian rhythm ISS
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 biological_processGO:0048511 rhythmic process IEA
 biological_processGO:1903377 negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway IDA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016363 nuclear matrix IDA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0042382 paraspeckles IDA
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex ISS
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding ISS
 molecular_functionGO:0001047 core promoter binding ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding ISS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
Show

 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
Show

 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
Show

 HP:0000194 Open mouth 
Show

 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
Show

 HP:0000276 Long face 
Show

 HP:0000448 Prominent nose 
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000545 Myopia 
Show

 HP:0000582 Upslanting palpebral fissures 
Show

 HP:0000678 Dental overcrowding 
Show

 HP:0000687 Widely spaced teeth 
Show

 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
Show

 HP:0000823 Delayed puberty 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001270 Motor retardation 
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
Show

 HP:0001321 Cerebellar hypoplasia 
Show

 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
Show

 HP:0001388 Joint laxity 
Show

 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
Show

 HP:0001533 Asthenic habitus "Asthenic habitus refers to a slender build with long limbs, an angular profile, and prominent muscles or bones." [HPO:curators]
Show

 HP:0001611 Nasal speech 
Show

 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
Show

 HP:0001643 Patent ductus arteriosus 
Show

 HP:0001655 Patent foramen ovale 
Show

 HP:0001667 Right ventricular hypertrophy "In this case the right ventricle is more muscular than normal, causing a characteristic boot-shaped (coeur-en-sabot) appearance as seen on anterior- posterior chest x-rays. Right ventricular hypertrophy is commonly associated with any form of right ventricular outflow obstruction or pulmonary hypertension, which may in turn owe its origin to left-sided disease. The echocardiographic signs are thickening of the anterior right ventricular wall and the septum. Cavity size is usually normal, or slightly enlarged. In many cases there is associated volume overload present due to tricuspid regurgitation, in the absence of this, septal motion is normal. This feature can also be a component of the separat entity tetralogy of Fallot in which case it is generally agreed to be a secondary anomaly, as the level of hypertrophy generally increases with age." [HPO:curators]
Show

 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
Show

 HP:0001822 Hallux valgus "Lateral deviation of the great toe (i.e., in the direction of the little toe)." [HPO:curators]
Show

 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
Show

 HP:0002020 Gastroesophageal reflux 
Show

 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
Show

 HP:0002684 Thickened calvaria "The presence of an abnormally thick calvaria." [HPO:curators]
Show

 HP:0002705 High, narrow palate "The presence of a high and narrow palate." [HPO:curators]
Show

 HP:0002808 Kyphosis 
Show

 HP:0004411 Deviated nasal septum 
Show

 HP:0011342 Mild global developmental delay "A mild delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
Show

 HP:0030223 Perseveration "Perseveration can be defined as the contextually inappropriate and unintentional repetition of a response or behavioral unit. In other words, the observed repetitiveness does not meet the demands of the situation, is not the product of deliberation, and may even unfold despite counterintention. Perseveration can therefore be differentiated from goal-directed and intentional forms of repetition, such as linguistic redundancies designed to enhance communicative or poetic impact." [HPO:probinson, pmid:9050113]
Show

 HP:0030682 Left ventricular noncompaction "Left ventricular noncompaction (LVNC) is defined by 3 markers: prominent left ventricular (LV) trabeculae, deep intertrabecular recesses, and the thin compacted layer." [PMID:16670098, PMID:25443708]
Show

 HP:0040194 Increased head circumference 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr