ENSDARG00000020509


Danio rerio

Features
Gene ID: ENSDARG00000020509
  
Biological name :srd5a1
  
Synonyms : srd5a1 / steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)
  
Possible biological names infered from orthology : P18405 / steroid 5 alpha-reductase 1
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 27836913
Gene end: 27858033
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000121677
Ensembl peptide - ENSDARP00000094674
NCBI entrez gene - 767715     See in Manteia.
RefSeq - NM_001076653
RefSeq Peptide - NP_001070121
swissprot - A5PMI4
ZFIN ID - ZDB-GENE-060929-938
Ensembl - ENSDARG00000020509
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRD5A1ENSGALG00000013063Gallus gallus
 P18405ENSG00000145545Homo sapiens
 Srd5a1ENSMUSG00000021594Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
srd5a2a / steroid-5-alpha-reductase, alpha polypeptide 2a / P31213* / SRD5A2* / steroid 5 alpha-reductase 2*ENSDARG0000004358744
srd5a2b / steroid-5-alpha-reductase, alpha polypeptide 2b / SRD5A2* / P31213* / Q99N99* / steroid 5 alpha-reductase 2* / 3-oxo-5-alpha-steroid 4-dehydrogenase 2 *ENSDARG0000003906740


Protein motifs (from Interpro)
Interpro ID Name
 IPR001104  3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
 IPR016636  3-oxo-5-alpha-steroid 4-dehydrogenase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006694 steroid biosynthetic process IBA
 biological_processGO:0008202 steroid metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity IBA
 molecular_functionGO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA


Pathways (from Reactome)
Pathway description
Androgen biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr