ENSDARG00000021252


Danio rerio

Features
Gene ID: ENSDARG00000021252
  
Biological name :cct6a
  
Synonyms : cct6a / chaperonin containing TCP1, subunit 6A (zeta 1)
  
Possible biological names infered from orthology : CCT6B / chaperonin containing TCP1 subunit 6A / chaperonin containing TCP1 subunit 6B / chaperonin containing Tcp1, subunit 6b (zeta) / P40227 / Q61390 / Q92526
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 41819288
Gene end: 41839684
  
Corresponding Affymetrix probe sets: Dr.6928.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000016831
Ensembl peptide - ENSDARP00000136804
Ensembl peptide - ENSDARP00000118006
Ensembl peptide - ENSDARP00000112608
NCBI entrez gene - 116994     See in Manteia.
RefSeq - XM_005161447
RefSeq Peptide - NP_958447
swissprot - A0A0R4IQH8
swissprot - E9QGU4
swissprot - Q7ZYX4
swissprot - E9QD64
ZFIN ID - ZDB-GENE-011018-2
Ensembl - ENSDARG00000021252
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCT6AENSGALG00000002448Gallus gallus
 CCT6AENSG00000146731Homo sapiens
 CCT6BENSG00000132141Homo sapiens
 Cct6bENSMUSG00000020698Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002194  Chaperonin TCP-1, conserved site
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR012722  T-complex protein 1, zeta subunit
 IPR017998  Chaperone tailless complex polypeptide 1 (TCP-1)
 IPR027409  GroEL-like apical domain superfamily
 IPR027413  GroEL-like equatorial domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0006458 "de novo" protein folding IBA
 biological_processGO:0061077 chaperone-mediated protein folding IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005832 chaperonin-containing T-complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0044183 protein binding involved in protein folding IBA
 molecular_functionGO:0051082 unfolded protein binding IEA


Pathways (from Reactome)
Pathway description
Association of TriC/CCT with target proteins during biosynthesis
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr