ENSDARG00000027143


Danio rerio

Features
Gene ID: ENSDARG00000027143
  
Biological name :aptx
  
Synonyms : aprataxin / aptx
  
Possible biological names infered from orthology : Q7TQC5 / Q7Z2E3
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 52653626
Gene end: 52659711
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000035368
Ensembl peptide - ENSDARP00000125307
NCBI entrez gene - 405797     See in Manteia.
RefSeq - XM_005160130
RefSeq - XM_009294519
swissprot - H0WEM9
swissprot - B8A444
ZFIN ID - ZDB-GENE-040628-2
Ensembl - ENSDARG00000027143
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 APTXENSGALG00000001954Gallus gallus
 APTXENSG00000137074Homo sapiens
 AptxENSMUSG00000028411Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pnkp / polynucleotide kinase 3-phosphatase / Q96T60*ENSDARG0000010045522


Protein motifs (from Interpro)
Interpro ID Name
 IPR000253  Forkhead-associated (FHA) domain
 IPR008984  SMAD/FHA domain superfamily
 IPR011146  HIT-like domain
 IPR013087  Zinc finger C2H2-type
 IPR019808  Histidine triad, conserved site
 IPR026963  Aprataxin
 IPR032566  Aprataxin, C2HE/C2H2/C2HC zinc finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0033699 DNA 5"-adenosine monophosphate hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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