ENSDARG00000027418


Danio rerio

Features
Gene ID: ENSDARG00000027418
  
Biological name :trappc4
  
Synonyms : trafficking protein particle complex 4 / trappc4
  
Possible biological names infered from orthology : Q9ES56 / Q9Y296
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 9315177
Gene end: 9321970
  
Corresponding Affymetrix probe sets: Dr.12763.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000032254
Ensembl peptide - ENSDARP00000141708
swissprot - A0A0R4IZL7
swissprot - F1QNE7
ZFIN ID - ZDB-GENE-040426-1734
Ensembl - ENSDARG00000027418
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRAPPC4ENSGALG00000007707Gallus gallus
 Q9Y296ENSG00000196655Homo sapiens
 Q9ES56ENSMUSG00000032112Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007233  Trafficking protein particle complex subunit
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0030008 TRAPP complex IEA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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