ENSMUSG00000032112


Mus musculus

Features
Gene ID: ENSMUSG00000032112
  
Biological name :Trappc4
  
Synonyms : Q9ES56 / trafficking protein particle complex 4 / Trappc4
  
Possible biological names infered from orthology : Q9Y296
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: A5.2
Gene start: 44403698
Gene end: 44407600
  
Corresponding Affymetrix probe sets: 10592850 (MoGene1.0st)   10338075 (MoGene1.0st)   10338347 (MoGene1.0st)   10339110 (MoGene1.0st)   10340870 (MoGene1.0st)   10341531 (MoGene1.0st)   10342918 (MoGene1.0st)   10343934 (MoGene1.0st)   10344604 (MoGene1.0st)   10338415 (MoGene1.0st)   10338698 (MoGene1.0st)   10341034 (MoGene1.0st)   10341129 (MoGene1.0st)   10343125 (MoGene1.0st)   10343337 (MoGene1.0st)   10343455 (MoGene1.0st)   10343667 (MoGene1.0st)   10343719 (MoGene1.0st)   10344360 (MoGene1.0st)   10344439 (MoGene1.0st)   10344466 (MoGene1.0st)   1415674_a_at (Mouse Genome 430 2.0 Array)   1429632_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000150263
Ensembl peptide - ENSMUSP00000034623
Ensembl peptide - ENSMUSP00000149324
NCBI entrez gene - 60409     See in Manteia.
MGI - MGI:1926211
RefSeq - NM_021789
RefSeq Peptide - NP_068561
swissprot - A0A1L1SR61
swissprot - Q3V493
swissprot - Q544R8
swissprot - Q9ES56
Ensembl - ENSMUSG00000032112
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc4ENSDARG00000027418Danio rerio
 TRAPPC4ENSGALG00000007707Gallus gallus
 Q9Y296ENSG00000196655Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007233  Trafficking protein particle complex subunit
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0016358 dendrite development IDA
 biological_processGO:0045212 neurotransmitter receptor biosynthetic process TAS
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005795 Golgi stack IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0008021 synaptic vesicle IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030008 TRAPP complex IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030425 dendrite IDA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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