ENSGALG00000007707


Gallus gallus

Features
Gene ID: ENSGALG00000007707
  
Biological name :TRAPPC4
  
Synonyms : trafficking protein particle complex subunit 4 / TRAPPC4
  
Possible biological names infered from orthology : Q9ES56 / Q9Y296 / trafficking protein particle complex 4
  
Species: Gallus gallus
  
Chr. number: 24
Strand: 1
Band:
Gene start: 5636109
Gene end: 5637888
  
Corresponding Affymetrix probe sets: GgaAffx.13161.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012474
NCBI entrez gene - 419788     See in Manteia.
RefSeq - NM_001006320
RefSeq Peptide - NP_001006320
swissprot - F1NU38
Ensembl - ENSGALG00000007707
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc4ENSDARG00000027418Danio rerio
 Q9Y296ENSG00000196655Homo sapiens
 Q9ES56ENSMUSG00000032112Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007233  Trafficking protein particle complex subunit
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0016358 dendrite development IEA
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005795 Golgi stack IEA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0030008 TRAPP complex IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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