ENSDARG00000028228


Danio rerio

Features
Gene ID: ENSDARG00000028228
  
Biological name :zbtb18
  
Synonyms : Q1L8W0 / zbtb18 / zinc finger and BTB domain containing 18
  
Possible biological names infered from orthology : Q99592 / Q9WUK6
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 11436130
Gene end: 11445034
  
Corresponding Affymetrix probe sets: Dr.14213.1.A1_at (Zebrafish Array)   Dr.16724.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000141791
Ensembl peptide - ENSDARP00000144804
Ensembl peptide - ENSDARP00000118751
NCBI entrez gene - 100003157     See in Manteia.
RefSeq - NM_001082952
RefSeq Peptide - NP_001076421
swissprot - A0A0H2UKG6
swissprot - Q1L8W0
ZFIN ID - ZDB-GENE-050419-73
Ensembl - ENSDARG00000028228
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZBTB18ENSGALG00000010705Gallus gallus
 Q99592ENSG00000179456Homo sapiens
 Q9WUK6ENSMUSG00000063659Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zbtb42 / zinc finger and BTB domain containing 42ENSDARG0000010276146
zbtb3 / zinc finger and BTB domain containing 3 / Q91X45* / Q9H5J0*ENSDARG0000003623529
hic1 / hypermethylated in cancer 1 / Q14526* / HIC ZBTB transcriptional repressor 1*ENSDARG0000005549323
hic2 / Q90W33 / hypermethylated in cancer 2 / Q96JB3* / HIC ZBTB transcriptional repressor 2*ENSDARG0000010049721
zbtb7a / zinc finger and BTB domain containing 7a / O88939* / O95365*ENSDARG0000003989919
zbtb7c / zinc finger and BTB domain containing 7C / A1YPR0*ENSDARG0000010098519
zbtb46 / zinc finger and BTB domain containing 46 / Q86UZ6* / Q8BID6*ENSDARG0000007819118
zbtb8b / zinc finger and BTB domain containing 8B / Q8NAP8* / AL033529.1*ENSDARG0000003588917
hic1l / hypermethylated in cancer 1 like / HIC2* / Q96JB3* / Q9JLZ6* / HIC ZBTB transcriptional repressor 2* / Hypermethylated in cancer 2 protein *ENSDARG0000004566017
zbtb7b / zinc finger and BTB domain containing 7B / O15156* / Q64321*ENSDARG0000002189116
zbtb10 / zinc finger and BTB domain containing 10 / Q96DT7*ENSDARG0000007710115
zbtb8a / zinc finger and BTB domain containing 8A / Q96BR9* / Q9CWH1*ENSDARG0000005922614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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