ENSG00000179456


Homo sapiens

Features
Gene ID: ENSG00000179456
  
Biological name :ZBTB18
  
Synonyms : Q99592 / ZBTB18 / zinc finger and BTB domain containing 18
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q44
Gene start: 244048939
Gene end: 244057476
  
Corresponding Affymetrix probe sets: 207164_s_at (Human Genome U133 Plus 2.0 Array)   212774_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000351539
Ensembl peptide - ENSP00000481278
NCBI entrez gene - 10472     See in Manteia.
OMIM - 608433
RefSeq - XM_017000060
RefSeq - NM_001278196
RefSeq - NM_006352
RefSeq - NM_205768
RefSeq - XM_005273006
RefSeq Peptide - NP_991331
RefSeq Peptide - NP_001265125
RefSeq Peptide - NP_006343
swissprot - Q99592
Ensembl - ENSG00000179456
  
Related genetic diseases (OMIM): 612337 - Mental retardation, autosomal dominant 22, 612337

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q1L8W0ENSDARG00000028228Danio rerio
 ZBTB18ENSGALG00000010705Gallus gallus
 Q9WUK6ENSMUSG00000063659Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B2RXF5 / ZBTB42 / zinc finger and BTB domain containing 42ENSG0000017962740
ZBTB3 / Q9H5J0 / zinc finger and BTB domain containing 3ENSG0000018567036
HIC2 / Q96JB3 / HIC ZBTB transcriptional repressor 2ENSG0000016963523
ZBTB5 / O15062 / zinc finger and BTB domain containing 5ENSG0000016879521
HIC1 / Q14526 / HIC ZBTB transcriptional repressor 1ENSG0000017737421
Q86UZ6 / ZBTB46 / zinc finger and BTB domain containing 46ENSG0000013058421
A1YPR0 / ZBTB7C / zinc finger and BTB domain containing 7CENSG0000018482820
O15156 / ZBTB7B / zinc finger and BTB domain containing 7BENSG0000016068520
O95365 / ZBTB7A / zinc finger and BTB domain containing 7AENSG0000017895120
Q8NAP8 / ZBTB8B / zinc finger and BTB domain containing 8BENSG0000027327419
AL033529.1ENSG0000025455318
Q96BR9 / ZBTB8A / zinc finger and BTB domain containing 8AENSG0000016006216
Q96DT7 / ZBTB10 / zinc finger and BTB domain containing 10ENSG0000020518915


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007519 skeletal muscle tissue development ISS
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0000228 nuclear chromosome TAS
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000219 Thin upper lip 
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 HP:0000233 Thin vermillion border 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000319 Flat philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000377 Abnormal form of ears "Abnormal form of the out part of the ear (also referred to as the auricle or pinna)." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0003828 Variable expressivity 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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