ENSDARG00000031489


Danio rerio

Features
Gene ID: ENSDARG00000031489
  
Biological name :zgc:193598
  
Synonyms : zgc:193598
  
Possible biological names infered from orthology : OGN / osteoglycin / P20774 / Q62000
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 19679557
Gene end: 19686791
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000048890
Ensembl peptide - ENSDARP00000137202
Ensembl peptide - ENSDARP00000150621
NCBI entrez gene - 100170815     See in Manteia.
RefSeq - NM_001130650
RefSeq Peptide - NP_001124122
swissprot - F1QLW6
ZFIN ID - ZDB-GENE-080723-61
Ensembl - ENSDARG00000031489
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OGNENSGALG00000026736Gallus gallus
 OGNENSG00000106809Homo sapiens
 OgnENSMUSG00000021390Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ogn / osteoglycin / P20774* / Q62000*ENSDARG0000004413262
optc / opticin / Q9UBM4* / opticin isoform 4 *ENSDARG0000001435843
epyc / epiphycan / P70186* / Q99645*ENSDARG0000005695040


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR027211  Mimecan
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007409 axonogenesis IBA
 cellular_componentGO:0005615 extracellular space IBA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
Keratan sulfate degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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