ENSDARG00000034007


Danio rerio

Features
Gene ID: ENSDARG00000034007
  
Biological name :prom1b
  
Synonyms : prom1b / prominin 1 b
  
Possible biological names infered from orthology : O43490 / PROM1 / prominin 1
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 22712931
Gene end: 22757145
  
Corresponding Affymetrix probe sets: Dr.9827.1.S1_at (Zebrafish Array)   NM_198071_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000112980
Ensembl peptide - ENSDARP00000112575
Ensembl peptide - ENSDARP00000122797
Ensembl peptide - ENSDARP00000137108
NCBI entrez gene - 378834     See in Manteia.
RefSeq - NM_198071
RefSeq Peptide - NP_932337
swissprot - F1QSA6
swissprot - A0A0R4IQK4
swissprot - F1RCM2
swissprot - F1RD29
ZFIN ID - ZDB-GENE-031003-1
Ensembl - ENSDARG00000034007
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PROM1ENSGALG00000014496Gallus gallus
 PROM1ENSG00000007062Homo sapiens
 Prom1ENSMUSG00000029086Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
prom1a / prominin 1a / PROM1* / O43490* / prominin 1*ENSDARG0000003996655
prom2 / prominin 2 / Q3UUY6* / Q8N271*ENSDARG0000003940628


Protein motifs (from Interpro)
Interpro ID Name
 IPR008795  Prominin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr