ENSGALG00000014496


Gallus gallus

Features
Gene ID: ENSGALG00000014496
  
Biological name :PROM1
  
Synonyms : PROM1 / prominin-1 isoform 4 precursor
  
Possible biological names infered from orthology : O43490 / prominin 1
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 77077463
Gene end: 77136277
  
Corresponding Affymetrix probe sets: Gga.2042.1.S1_at (Chicken Array)   GgaAffx.11899.1.S1_at (Chicken Array)   GgaAffx.9212.1.S1_s_at (Chicken Array)   GgaAffx.9212.6.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000059340
Ensembl peptide - ENSGALP00000023357
Ensembl peptide - ENSGALP00000041069
Ensembl peptide - ENSGALP00000041684
NCBI entrez gene - 422825     See in Manteia.
RefSeq - XM_015285753
RefSeq - XM_015285744
RefSeq - XM_015285745
RefSeq - XM_015285746
RefSeq - XM_015285747
RefSeq - XM_015285748
RefSeq - XM_015285749
RefSeq - XM_015285750
RefSeq - XM_015285751
RefSeq - NM_001291649
RefSeq - NM_001291651
RefSeq - NM_001291652
RefSeq - NM_001291653
RefSeq - XM_004936154
RefSeq - XM_004936155
RefSeq - XM_015285739
RefSeq - XM_015285740
RefSeq - XM_015285741
RefSeq - XM_015285742
RefSeq Peptide - NP_001278581
RefSeq Peptide - NP_001278582
RefSeq Peptide - NP_001278578
RefSeq Peptide - NP_001278580
swissprot - Q5ZLD8
swissprot - F1CLF0
swissprot - F1CLE7
swissprot - E1C9E2
Ensembl - ENSGALG00000014496
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prom1aENSDARG00000039966Danio rerio
 prom1bENSDARG00000034007Danio rerio
 PROM1ENSG00000007062Homo sapiens
 Prom1ENSMUSG00000029086Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PROM2 / prominin 2 / Q3UUY6* / Q8N271*ENSGALG0000004134725
ENSGALG0000000764521


Protein motifs (from Interpro)
Interpro ID Name
 IPR008795  Prominin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045494 photoreceptor cell maintenance IEA
 biological_processGO:0060042 retina morphogenesis in camera-type eye IEA
 biological_processGO:0060219 camera-type eye photoreceptor cell differentiation IEA
 biological_processGO:0072112 glomerular visceral epithelial cell differentiation IEA
 biological_processGO:0072139 glomerular parietal epithelial cell differentiation IEA
 biological_processGO:2000768 positive regulation of nephron tubule epithelial cell differentiation IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0042622 photoreceptor outer segment membrane IEA
 cellular_componentGO:0070062 extracellular exosome IEA
 molecular_functionGO:0042805 actinin binding IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr