ENSDARG00000034734


Danio rerio

Features
Gene ID: ENSDARG00000034734
  
Biological name :med6
  
Synonyms : med6 / mediator complex subunit 6 / Q6IQ63
  
Possible biological names infered from orthology : Mus musculus mediator complex subunit 6 (Med6), transcript variant 1, mRNA. / O75586 / Q921D4
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 36135122
Gene end: 36141486
  
Corresponding Affymetrix probe sets: Dr.766.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000044114
Ensembl peptide - ENSDARP00000118786
NCBI entrez gene - 415174     See in Manteia.
swissprot - E9QI12
swissprot - Q6IQ63
ZFIN ID - ZDB-GENE-040625-61
Ensembl - ENSDARG00000034734
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MED6ENSGALG00000029743Gallus gallus
 MED6ENSG00000133997Homo sapiens
 Med6ENSMUSG00000002679Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007018  Mediator complex, subunit Med6
 IPR016820  Mediator complex, subunit Med6, metazoa/plant


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0051123 RNA polymerase II transcriptional preinitiation complex assembly IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016592 mediator complex IBA
 cellular_componentGO:0070847 core mediator complex IBA
 molecular_functionGO:0001128 RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly IBA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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