ENSMUSG00000002679


Mus musculus

Features
Gene ID: ENSMUSG00000002679
  
Biological name :Med6
  
Synonyms : Med6 / Mus musculus mediator complex subunit 6 (Med6), transcript variant 1, mRNA. / Q921D4
  
Possible biological names infered from orthology : mediator complex subunit 6 / O75586
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: D1
Gene start: 81573557
Gene end: 81595008
  
Corresponding Affymetrix probe sets: 10401335 (MoGene1.0st)   1424264_at (Mouse Genome 430 2.0 Array)   1439737_x_at (Mouse Genome 430 2.0 Array)   1458343_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000125103
Ensembl peptide - ENSMUSP00000125156
Ensembl peptide - ENSMUSP00000002756
Ensembl peptide - ENSMUSP00000124361
NCBI entrez gene - 69792     See in Manteia.
MGI - MGI:1917042
RefSeq - XM_017315178
RefSeq - NM_001347384
RefSeq - NM_001347385
RefSeq - NM_027213
RefSeq - XM_006516211
RefSeq - XM_006516213
RefSeq Peptide - NP_001334315
RefSeq Peptide - NP_081489
RefSeq Peptide - NP_001334314
RefSeq Peptide - NP_001334313
swissprot - A0A0R4IZX3
swissprot - E0CYA6
swissprot - E0CXQ3
swissprot - Q921D4
Ensembl - ENSMUSG00000002679
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 med6ENSDARG00000034734Danio rerio
 MED6ENSGALG00000029743Gallus gallus
 MED6ENSG00000133997Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007018  Mediator complex, subunit Med6
 IPR016820  Mediator complex, subunit Med6, metazoa/plant


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0019827 stem cell population maintenance IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISO
 biological_processGO:0051123 RNA polymerase II transcriptional preinitiation complex assembly IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016592 mediator complex IEA
 cellular_componentGO:0070847 core mediator complex IBA
 molecular_functionGO:0001128 RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly IBA
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0003713 transcription coactivator activity ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding ISO
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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