ENSGALG00000029743


Gallus gallus

Features
Gene ID: ENSGALG00000029743
  
Biological name :MED6
  
Synonyms : MED6 / mediator complex subunit 6
  
Possible biological names infered from orthology : Mus musculus mediator complex subunit 6 (Med6), transcript variant 1, mRNA. / O75586 / Q921D4
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 27427115
Gene end: 27435659
  
Corresponding Affymetrix probe sets: Gga.10840.1.S1_at (Chicken Array)   GgaAffx.20616.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057366
Ensembl peptide - ENSGALP00000059748
NCBI entrez gene - 426282     See in Manteia.
RefSeq - NM_001159425
RefSeq Peptide - NP_001152897
swissprot - A0A1L1RLU6
swissprot - A0A1D5PWN0
Ensembl - ENSGALG00000029743
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 med6ENSDARG00000034734Danio rerio
 MED6ENSG00000133997Homo sapiens
 Med6ENSMUSG00000002679Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007018  Mediator complex, subunit Med6
 IPR016820  Mediator complex, subunit Med6, metazoa/plant


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0019827 stem cell population maintenance IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016592 mediator complex IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr