ENSDARG00000034823


Danio rerio

Features
Gene ID: ENSDARG00000034823
  
Biological name :copg2
  
Synonyms : coatomer protein complex, subunit gamma 2 / copg2 / Q9PUE4
  
Possible biological names infered from orthology : Coatomer subunit gamma-2 / Q9QXK3 / Q9UBF2
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 15983541
Gene end: 15996191
  
Corresponding Affymetrix probe sets: Dr.10319.1.S1_at (Zebrafish Array)   Dr.10319.2.S1_a_at (Zebrafish Array)   NM_130994_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000043659
NCBI entrez gene - 30187     See in Manteia.
RefSeq - NM_130994
RefSeq Peptide - NP_571069
swissprot - Q9PUE4
ZFIN ID - ZDB-GENE-000208-8
Ensembl - ENSDARG00000034823
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COPG2ENSGALG00000008144Gallus gallus
 COPG2ENSG00000158623Homo sapiens
 Copg2ENSMUSG00000025607Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002553  Clathrin/coatomer adaptor, adaptin-like, N-terminal
 IPR009028  Coatomer/calthrin adaptor appendage, C-terminal subdomain
 IPR011989  Armadillo-like helical
 IPR013040  Coatomer, gamma subunit, appendage, Ig-like subdomain
 IPR013041  Clathrin adaptor, appendage, Ig-like subdomain superfamily
 IPR016024  Armadillo-type fold
 IPR017106  Coatomer gamma subunit
 IPR032154  Coatomer subunit gamma, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030117 membrane coat IEA
 cellular_componentGO:0030126 COPI vesicle coat IEA
 cellular_componentGO:0030663 COPI-coated vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000019581 uso1 / USO1 vesicle transport factor / O60763* / Q9Z1Z0* / USO1 vesicle docking factor*  / complex / reaction
 ENSDARG00000002792 arcn1a / archain 1a / ARCN1* / P48444* / Q5XJY5* / archain 1* / Coatomer subunit delta *  / complex
 ENSDARG00000031214 arcn1b / archain 1b / ARCN1* / P48444* / Q5XJY5* / archain 1* / Coatomer subunit delta *  / complex
 ENSDARG00000027016 gbf1 / golgi brefeldin A resistant guanine nucleotide exchange factor 1 / Q92538*  / reaction / complex
 ENSDARG00000056557 copb1 / Q66HV4 / coatomer protein complex, subunit beta 1 / P53618* / Q9JIF7* / Coatomer subunit beta *  / complex






 

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