ENSDARG00000019581


Danio rerio

Features
Gene ID: ENSDARG00000019581
  
Biological name :uso1
  
Synonyms : uso1 / USO1 vesicle transport factor
  
Possible biological names infered from orthology : O60763 / Q9Z1Z0 / USO1 vesicle docking factor
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 26467071
Gene end: 26509316
  
Corresponding Affymetrix probe sets: Dr.21851.1.A1_at (Zebrafish Array)   Dr.8996.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000101948
Ensembl peptide - ENSDARP00000153932
Ensembl peptide - ENSDARP00000138290
Ensembl peptide - ENSDARP00000130599
Ensembl peptide - ENSDARP00000015515
NCBI entrez gene - 393124     See in Manteia.
swissprot - E7F2J5
swissprot - A0A0R4IRG3
swissprot - A0A0R4IC30
swissprot - Q7ZW40
ZFIN ID - ZDB-GENE-040426-688
Ensembl - ENSDARG00000019581
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USO1ENSGALG00000010878Gallus gallus
 USO1ENSG00000138768Homo sapiens
 Uso1ENSMUSG00000029407Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR006953  Vesicle tethering protein Uso1/P115-like , head domain
 IPR006955  Uso1/p115-like vesicle tethering protein, C-terminal
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0045056 transcytosis IBA
 biological_processGO:0048211 Golgi vesicle docking IBA
 biological_processGO:0048280 vesicle fusion with Golgi apparatus IEA
 biological_processGO:0061025 membrane fusion IBA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0005795 Golgi stack IBA
 cellular_componentGO:0012507 ER to Golgi transport vesicle membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
COPI-mediated anterograde transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000103516 sec24c / SEC24 homolog C, COPII coat complex component / P53992* / Sec24 related gene family, member C (S. cerevisiae)*  / reaction / complex
 ENSDARG00000071906 sec24b / SEC24 homolog B, COPII coat complex component / O95487* / Sec24 related gene family, member B (S. cerevisiae)*  / reaction / complex
 ENSDARG00000031214 arcn1b / archain 1b / ARCN1* / P48444* / Q5XJY5* / archain 1* / Coatomer subunit delta *  / complex / reaction
 ENSDARG00000056557 copb1 / Q66HV4 / coatomer protein complex, subunit beta 1 / P53618* / Q9JIF7* / Coatomer subunit beta *  / reaction / complex
 ENSDARG00000027016 gbf1 / golgi brefeldin A resistant guanine nucleotide exchange factor 1 / Q92538*  / reaction / complex
 ENSDARG00000034823 copg2 / Q9PUE4 / coatomer protein complex, subunit gamma 2 / Q9QXK3* / Q9UBF2* / Coatomer subunit gamma-2 *  / complex / reaction
 ENSDARG00000002792 arcn1a / archain 1a / ARCN1* / P48444* / Q5XJY5* / archain 1* / Coatomer subunit delta *  / reaction / complex
 ENSDARG00000053070 gosr2 / golgi SNAP receptor complex member 2 / O14653* / O35166* / AC005670.2*  / reaction
 ENSDARG00000104375 sec24a / SEC24 homolog A, COPII coat complex component / O95486*  / reaction / complex
 ENSDARG00000054807 sec13 / SEC13 homolog, nuclear pore and COPII coat complex component / P55735* / Q9D1M0*  / reaction / complex
 ENSDARG00000063197 golga2 / golgin A2 / A6NMD2* / A7E2F4* / A8MQT2* / A8MZA4* / D6RF30* / F8WBI6* / A6NCC3* / A6NDK9* / A6NDN3* / H3BSY2* / I6L899* / P0CG33* / P0CJ92* / Q08379* / Q08AF8* / Q8N9W4* / Q921M4* ...  / complex / reaction
 ENSDARG00000019581 uso1 / USO1 vesicle transport factor / O60763* / Q9Z1Z0* / USO1 vesicle docking factor*  / complex
 ENSDARG00000104230 Q7SZE5 / sec23a / Sec23 homolog A, COPII coat complex component / Q15436* / Q01405* / Protein transport protein Sec23A * / Sec23 homolog A, coat complex II component*  / reaction / complex
 ENSDARG00000100435 Q7SXP0 / sec22bb / SEC22 homolog B, vesicle trafficking protein b / SEC22B* / O08547* / O75396* / Vesicle-trafficking protein SEC22b * / SEC22 homolog B, vesicle trafficking protein (gene/p...  / reaction / complex
 ENSDARG00000034885 bet1 / Bet1 golgi vesicular membrane trafficking protein / O15155* / O35623* / BET1 homolog *  / reaction
 ENSDARG00000025033 stx5a / syntaxin 5A / STX5* / Q8K1E0* / Q13190* / syntaxin 5*  / reaction
 ENSDARG00000029663 rab1ab / RAB1A, member RAS oncogene family b / Rab1* / RAB1A* / P62821* / P62820* / Ras-related protein Rab-1A * / RAB1A, member RAS oncogene family*  / reaction / complex
 ENSDARG00000021082 sec31a / SEC31 homolog A, COPII coat complex component / O94979* / Q3UPL0* / Protein transport protein Sec31A *  / reaction / complex
 ENSDARG00000006125 Q6P3K7 / csnk1db / casein kinase 1, delta b / Q9DC28* / CSNK1D* / P48730* / casein kinase 1 delta*  / reaction
 ENSDARG00000008370 Q7T2E3 / csnk1da / casein kinase 1, delta a / CSNK1D* / P48730* / casein kinase 1 delta*  / reaction






 

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