ENSDARG00000035608


Danio rerio

Features
Gene ID: ENSDARG00000035608
  
Biological name :pgam5
  
Synonyms : pgam5 / PGAM family member 5, serine/threonine protein phosphatase, mitochondrial / Q502L2
  
Possible biological names infered from orthology : PGAM family member 5, mitochondrial serine/threonine protein phosphatase / Q8BX10 / Q96HS1 / Serine/threonine-protein phosphatase PGAM5, mitochondrial
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 18925367
Gene end: 18936235
  
Corresponding Affymetrix probe sets: Dr.24263.1.A1_at (Zebrafish Array)   Dr.25010.1.A1_at (Zebrafish Array)   NM_001007323_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000051620
NCBI entrez gene - 492357     See in Manteia.
RefSeq - XM_005165077
RefSeq - NM_001007323
RefSeq Peptide - NP_001007324
swissprot - Q502L2
ZFIN ID - ZDB-GENE-030131-683
Ensembl - ENSDARG00000035608
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PGAM5ENSGALG00000002137Gallus gallus
 PGAM5ENSG00000247077Homo sapiens
 Pgam5ENSMUSG00000029500Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013078  Histidine phosphatase superfamily, clade-1
 IPR029033  Histidine phosphatase superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0012501 programmed cell death IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Receptor Mediated Mitophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000040822 fundc1 / Q6DH87 / FUN14 domain containing 1 / Q9DB70* / Q8IVP5* / FUN14 domain-containing protein 1 *  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr