ENSDARG00000040822


Danio rerio

Features
Gene ID: ENSDARG00000040822
  
Biological name :fundc1
  
Synonyms : FUN14 domain containing 1 / fundc1 / Q6DH87
  
Possible biological names infered from orthology : FUN14 domain-containing protein 1 / Q8IVP5 / Q9DB70
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 33783549
Gene end: 33785200
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120952
Ensembl peptide - ENSDARP00000059836
NCBI entrez gene - 436984     See in Manteia.
RefSeq - NM_001002711
RefSeq Peptide - NP_001002711
swissprot - B8A5Q5
swissprot - Q6DH87
ZFIN ID - ZDB-GENE-040718-466
Ensembl - ENSDARG00000040822
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 E1BWM5ENSGALG00000028187Gallus gallus
 FUNDC1ENSG00000069509Homo sapiens
 Fundc1ENSMUSG00000025040Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fundc2 / fun14 domain containing 2 / Q9BWH2* / Q9D6K8* / 1700034I23Rik* / RIKEN cDNA 1700034I23 gene* / FUN14 domain-containing protein 2 *ENSDARG0000010374056


Protein motifs (from Interpro)
Interpro ID Name
 IPR007014  FUN14


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000422 autophagy of mitochondrion ISS
 biological_processGO:0001666 response to hypoxia ISS
 biological_processGO:0006914 autophagy IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031307 integral component of mitochondrial outer membrane ISS
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Receptor Mediated Mitophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000035608 pgam5 / Q502L2 / PGAM family member 5, serine/threonine protein phosphatase, mitochondrial / Q8BX10* / Q96HS1* / Serine/threonine-protein phosphatase PGAM5, mitochondrial * / PGAM family me...  / reaction
 ENSDARG00000101127 map1lc3b / microtubule-associated protein 1 light chain 3 beta / Q9GZQ8* / Q9CQV6* / A6NCE7* / MAP1LC3B2* / Microtubule-associated proteins 1A/1B light chain 3B * / microtubule associated p...  / reaction / complex
 ENSDARG00000033609 map1lc3a / microtubule-associated protein 1 light chain 3 alpha / Q91VR7* / Q9H492* / Microtubule-associated proteins 1A/1B light chain 3A *  / reaction / complex
 ENSDARG00000023396 atg5 / ATG5 autophagy related 5 homolog (S. cerevisiae) / Q99J83* / Q9H1Y0* / autophagy related 5* / Autophagy protein 5 *  / reaction / complex
 ENSDARG00000008107 src / Q1JPZ3 / v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog / P12931* / P05480* / Neuronal proto-onco tyrosine-protein kinase Src * / SRC proto-oncogene, non-receptor tyr...  / reaction
 ENSDARG00000074481 ulk1b / unc-51 like autophagy activating kinase 1 / ULK1* / O75385* / unc-51 like kinase 1*  / reaction






 

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