ENSDARG00000035958


Danio rerio

Features
Gene ID: ENSDARG00000035958
  
Biological name :tnni2b.1
  
Synonyms : tnni2b.1 / troponin I type 2b (skeletal, fast), tandem duplicate 1
  
Possible biological names infered from orthology : P13412 / P48788 / TNNI2 / troponin I2, fast skeletal type / Troponin I, fast skeletal muscle
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 39399747
Gene end: 39406763
  
Corresponding Affymetrix probe sets: Dr.17891.1.S1_at (Zebrafish Array)   NM_001017587_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000123349
Ensembl peptide - ENSDARP00000023228
Ensembl peptide - ENSDARP00000120317
NCBI entrez gene - 550249     See in Manteia.
RefSeq - NM_001136492
RefSeq - NM_001017587
RefSeq Peptide - NP_001017587
RefSeq Peptide - NP_001129964
swissprot - F1QCC0
swissprot - E9QCC3
ZFIN ID - ZDB-GENE-050417-49
Ensembl - ENSDARG00000035958
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TNNI2ENSGALG00000006591Gallus gallus
 TNNI2ENSG00000130598Homo sapiens
 Tnni2ENSMUSG00000031097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tnni2a.4 / troponin I type 2a (skeletal, fast), tandem duplicate 4 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000002906982
tnni2b.2 / troponin I type 2b (skeletal, fast), tandem duplicate 2 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000002999582
tnni2a.3 / troponin I type 2a (skeletal, fast), tandem duplicate 3 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000001375277
tnni2a.1 / troponin I type 2a (skeletal, fast), tandem duplicate 1 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000004559276
tnni2a.2 / troponin I type 2a (skeletal, fast), tandem duplicate 2 / TNNI2* / P48788* / P13412* / troponin I2, fast skeletal type* / Troponin I, fast skeletal muscle *ENSDARG0000000584168
tnni1c / troponin I, skeletal, slow cENSDARG0000004255956
tnni1d / troponin I, skeletal, slow dENSDARG0000007376655
tnni1b / troponin I type 1b (skeletal, slow) / TNNI1* / P19237* / troponin I1, slow skeletal type*ENSDARG0000005270855
tnni1a / troponin I type 1a (skeletal, slow) / TNNI1* / Q9WUZ5* / P19237* / troponin I1, slow skeletal type* / Troponin I, slow skeletal muscle *ENSDARG0000000047452
tnni4b.2 / troponin I4b, tandem duplicate 2ENSDARG0000003667151
tnni4a / troponin I4aENSDARG0000009987047
tnni4b.1 / troponin I4b, tandem duplicate 1ENSDARG0000009299944


Protein motifs (from Interpro)
Interpro ID Name
 IPR001978  Troponin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003009 skeletal muscle contraction IBA
 biological_processGO:0060048 cardiac muscle contraction IBA
 cellular_componentGO:0005861 troponin complex IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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