ENSDARG00000036156


Danio rerio

Features
Gene ID: ENSDARG00000036156
  
Biological name :fnbp1a
  
Synonyms : fnbp1a / formin binding protein 1a
  
Possible biological names infered from orthology : FNBP1 / formin binding protein 1 / Mus musculus formin binding protein 1 (Fnbp1), transcript variant 6, mRNA. / Q80TY0 / Q96RU3
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 11578318
Gene end: 11640240
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000086185
NCBI entrez gene - 558990     See in Manteia.
RefSeq - NM_001123244
RefSeq Peptide - NP_001116716
swissprot - B0UXI0
ZFIN ID - ZDB-GENE-081105-105
Ensembl - ENSDARG00000036156
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FNBP1ENSGALG00000004088Gallus gallus
 FNBP1ENSG00000187239Homo sapiens
 Fnbp1ENSMUSG00000075415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fnbp1b / formin binding protein 1b / FNBP1* / Q80TY0* / Q96RU3* / formin binding protein 1* / Mus musculus formin binding protein 1 (Fnbp1), transcript variant 6, mRNA.*ENSDARG0000010102866
fnbp1l / formin binding protein 1-like / Q5T0N5*ENSDARG0000002013147
trip10a / thyroid hormone receptor interactor 10a / Q15642* / TRIP10* / thyroid hormone receptor interactor 10*ENSDARG0000000567943
trip10b / thyroid hormone receptor interactor 10b / Q15642* / TRIP10* / thyroid hormone receptor interactor 10*ENSDARG0000010078831
fnbp1b / formin binding protein 1b / FNBP1* / Q80TY0* / Q96RU3* / formin binding protein 1* / Mus musculus formin binding protein 1 (Fnbp1), transcript variant 6, mRNA.*ENSDARG0000009636714


Protein motifs (from Interpro)
Interpro ID Name
 IPR001060  FCH domain
 IPR001452  SH3 domain
 IPR027267  AH/BAR domain superfamily
 IPR031160  F-BAR domain
 IPR035492  FNBP1, SH3 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IEA


Pathways (from Reactome)
Pathway description
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000036156 fnbp1a / formin binding protein 1a / FNBP1* / Q80TY0* / Q96RU3* / formin binding protein 1* / Mus musculus formin binding protein 1 (Fnbp1), transcript variant 6, mRNA.*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr