ENSG00000187239


Homo sapiens

Features
Gene ID: ENSG00000187239
  
Biological name :FNBP1
  
Synonyms : FNBP1 / formin binding protein 1 / Q96RU3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q34.11
Gene start: 129887187
Gene end: 130043194
  
Corresponding Affymetrix probe sets: 212288_at (Human Genome U133 Plus 2.0 Array)   213940_s_at (Human Genome U133 Plus 2.0 Array)   230086_at (Human Genome U133 Plus 2.0 Array)   230389_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000347907
Ensembl peptide - ENSP00000407548
Ensembl peptide - ENSP00000413625
Ensembl peptide - ENSP00000415602
Ensembl peptide - ENSP00000389117
NCBI entrez gene - 23048     See in Manteia.
OMIM - 606191
RefSeq - XM_017014494
RefSeq - XM_017014490
RefSeq - XM_017014491
RefSeq - XM_017014492
RefSeq - XM_017014493
RefSeq - NM_015033
RefSeq - XM_005251815
RefSeq - XM_005251820
RefSeq - XM_005251821
RefSeq - XM_005251822
RefSeq - XM_005251823
RefSeq - XM_005251824
RefSeq - XM_005251825
RefSeq - XM_005251826
RefSeq - XM_005251827
RefSeq - XM_005251828
RefSeq - XM_005251829
RefSeq - XM_005251830
RefSeq - XM_005251831
RefSeq - XM_005251832
RefSeq - XM_005251833
RefSeq - XM_005251834
RefSeq - XM_006717016
RefSeq - XM_011518399
RefSeq - XM_011518400
RefSeq - XM_011518401
RefSeq - XM_011518402
RefSeq - XM_017014487
RefSeq - XM_017014488
RefSeq - XM_017014489
RefSeq Peptide - NP_055848
swissprot - H0Y7W6
swissprot - B7ZL14
swissprot - Q96RU3
Ensembl - ENSG00000187239
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fnbp1aENSDARG00000036156Danio rerio
 fnbp1bENSDARG00000101028Danio rerio
 fnbp1bENSDARG00000096367Danio rerio
 FNBP1ENSGALG00000004088Gallus gallus
 Fnbp1ENSMUSG00000075415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FNBP1L / Q5T0N5 / formin binding protein 1 likeENSG0000013794255
Q15642 / TRIP10 / thyroid hormone receptor interactor 10ENSG0000012573349


Protein motifs (from Interpro)
Interpro ID Name
 IPR001060  FCH domain
 IPR001452  SH3 domain
 IPR027267  AH/BAR domain superfamily
 IPR028532  Formin-binding protein 1
 IPR031160  F-BAR domain
 IPR035492  FNBP1, SH3 domain
 IPR036028  SH3-like domain superfamily
 IPR037449  Formin-binding protein 1, F-BAR domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0061024 membrane organization TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0005938 cell cortex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000187239 FNBP1 / Q96RU3 / formin binding protein 1  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr