ENSMUSG00000075415


Mus musculus

Features
Gene ID: ENSMUSG00000075415
  
Biological name :Fnbp1
  
Synonyms : Fnbp1 / Mus musculus formin binding protein 1 (Fnbp1), transcript variant 6, mRNA. / Q80TY0
  
Possible biological names infered from orthology : formin binding protein 1 / Q96RU3
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: B
Gene start: 31026206
Gene end: 31142008
  
Corresponding Affymetrix probe sets: 10481540 (MoGene1.0st)   1426983_at (Mouse Genome 430 2.0 Array)   1451806_at (Mouse Genome 430 2.0 Array)   1453746_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000109189
Ensembl peptide - ENSMUSP00000109188
Ensembl peptide - ENSMUSP00000109190
Ensembl peptide - ENSMUSP00000141681
Ensembl peptide - ENSMUSP00000121282
Ensembl peptide - ENSMUSP00000120580
Ensembl peptide - ENSMUSP00000115013
Ensembl peptide - ENSMUSP00000109194
Ensembl peptide - ENSMUSP00000109192
Ensembl peptide - ENSMUSP00000074796
Ensembl peptide - ENSMUSP00000097781
Ensembl peptide - ENSMUSP00000097782
Ensembl peptide - ENSMUSP00000109181
Ensembl peptide - ENSMUSP00000109184
NCBI entrez gene - 14269     See in Manteia.
MGI - MGI:109606
RefSeq - XM_017315555
RefSeq - NM_001355105
RefSeq - NM_001355106
RefSeq - NM_019406
RefSeq - XM_006497684
RefSeq - XM_006497685
RefSeq - XM_006497686
RefSeq - XM_006497687
RefSeq - XM_006497688
RefSeq - XM_006497689
RefSeq - XM_006497690
RefSeq - XM_006497691
RefSeq - XM_006497692
RefSeq - XM_006497693
RefSeq - XM_006497694
RefSeq - XM_006497695
RefSeq - XM_017315551
RefSeq - XM_017315554
RefSeq - NM_001038700
RefSeq - NM_001177648
RefSeq - NM_001177649
RefSeq - NM_001177650
RefSeq Peptide - NP_001171119
RefSeq Peptide - NP_001171120
RefSeq Peptide - NP_001171121
RefSeq Peptide - NP_001342034
RefSeq Peptide - NP_001342035
RefSeq Peptide - NP_062279
RefSeq Peptide - NP_001033789
swissprot - A2AQ39
swissprot - A0A0A6YWT1
swissprot - A2AQ47
swissprot - Q80TY0
swissprot - A2AQ45
swissprot - A2AQ44
swissprot - A2AQ43
swissprot - A2AQ42
swissprot - A2AQ41
swissprot - F6VVN1
Ensembl - ENSMUSG00000075415
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fnbp1aENSDARG00000036156Danio rerio
 fnbp1bENSDARG00000101028Danio rerio
 fnbp1bENSDARG00000096367Danio rerio
 FNBP1ENSGALG00000004088Gallus gallus
 FNBP1ENSG00000187239Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Fnbp1l / formin binding protein 1 like / Q5T0N5*ENSMUSG0000003973554
Q8CJ53 / Trip10 / thyroid hormone receptor interactor 10 / Q15642*ENSMUSG0000001948746


Protein motifs (from Interpro)
Interpro ID Name
 IPR001060  FCH domain
 IPR001452  SH3 domain
 IPR027267  AH/BAR domain superfamily
 IPR028532  Formin-binding protein 1
 IPR031160  F-BAR domain
 IPR035492  FNBP1, SH3 domain
 IPR036028  SH3-like domain superfamily
 IPR037449  Formin-binding protein 1, F-BAR domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0005938 cell cortex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0042802 identical protein binding ISO


Pathways (from Reactome)
Pathway description
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000075415 Fnbp1 / Q80TY0 / Mus musculus formin binding protein 1 (Fnbp1), transcript variant 6, mRNA. / Q96RU3* / formin binding protein 1*  / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr