ENSDARG00000036592


Danio rerio

Features
Gene ID: ENSDARG00000036592
  
Biological name :setd4
  
Synonyms : setd4 / SET domain containing 4
  
Possible biological names infered from orthology : Q9NVD3
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 47106268
Gene end: 47114319
  
Corresponding Affymetrix probe sets: Dr.7374.1.A1_at (Zebrafish Array)   NM_001045562_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000053156
Ensembl peptide - ENSDARP00000112573
NCBI entrez gene - 564058     See in Manteia.
RefSeq - NM_001045562
RefSeq Peptide - NP_001039027
swissprot - A8E7F1
swissprot - A8E7F0
ZFIN ID - ZDB-GENE-050808-2
Ensembl - ENSDARG00000036592
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SETD4ENSGALG00000016024Gallus gallus
 SETD4ENSG00000185917Homo sapiens
 Setd4ENSMUSG00000022948Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
setd3 / SET domain containing 3 / Q86TU7* / Q91WC0*ENSDARG0000001651322


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR015353  Rubisco LSMT, substrate-binding domain
 IPR016852  SET domain methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018023 peptidyl-lysine trimethylation IBA
 biological_processGO:0018026 peptidyl-lysine monomethylation IBA
 biological_processGO:0042254 ribosome biogenesis IBA
 cellular_componentGO:0005730 nucleolus IBA
 molecular_functionGO:0016279 protein-lysine N-methyltransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr