ENSG00000185917


Homo sapiens

Features
Gene ID: ENSG00000185917
  
Biological name :SETD4
  
Synonyms : Q9NVD3 / SETD4 / SET domain containing 4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 21
Strand: -1
Band: q22.12
Gene start: 36034541
Gene end: 36079389
  
Corresponding Affymetrix probe sets: 213989_x_at (Human Genome U133 Plus 2.0 Array)   219482_at (Human Genome U133 Plus 2.0 Array)   230899_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000382161
Ensembl peptide - ENSP00000382163
Ensembl peptide - ENSP00000413318
Ensembl peptide - ENSP00000399998
Ensembl peptide - ENSP00000396837
Ensembl peptide - ENSP00000394822
Ensembl peptide - ENSP00000392463
Ensembl peptide - ENSP00000329189
Ensembl peptide - ENSP00000382152
Ensembl peptide - ENSP00000382156
Ensembl peptide - ENSP00000382158
Ensembl peptide - ENSP00000382159
NCBI entrez gene - 54093     See in Manteia.
RefSeq - XM_017028405
RefSeq - NM_017438
RefSeq - XM_011529636
RefSeq - XM_011529637
RefSeq - XM_011529638
RefSeq - XM_011529639
RefSeq - XM_011529640
RefSeq - XM_011529642
RefSeq - XM_011529643
RefSeq - XM_011529644
RefSeq - XM_017028403
RefSeq - XM_017028404
RefSeq - NM_001007259
RefSeq - NM_001007261
RefSeq - NM_001286752
RefSeq Peptide - NP_001007262
RefSeq Peptide - NP_001273681
RefSeq Peptide - NP_059134
RefSeq Peptide - NP_001007260
swissprot - C9J256
swissprot - A8MTS1
swissprot - C9JYV0
swissprot - Q9NVD3
swissprot - C9JWV5
swissprot - C9JPA1
swissprot - C9JIU9
Ensembl - ENSG00000185917
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 setd4ENSDARG00000036592Danio rerio
 SETD4ENSGALG00000016024Gallus gallus
 Setd4ENSMUSG00000022948Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SETD3 / Q86TU7 / SET domain containing 3ENSG0000018357620


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR015353  Rubisco LSMT, substrate-binding domain
 IPR016852  SET domain methyltransferase
 IPR036464  Rubisco LSMT, substrate-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018023 peptidyl-lysine trimethylation IBA
 biological_processGO:0018026 peptidyl-lysine monomethylation IBA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0042254 ribosome biogenesis IBA
 cellular_componentGO:0005730 nucleolus IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016279 protein-lysine N-methyltransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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